Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactosyl transferase gma12/mnn10 family | PMI12_01444 | Not Available | Positive | 1482216 - 1483562 | 50806.8 |
| hypothetical protein | PMI12_01445 | Not Available | Positive | 1483584 - 1484450 | 32776.8 |
| putative metal-dependent hydrolase | PMI12_01446 | Not Available | Negative | 1484564 - 1485085 | 19725.1 |
| molecular chaperone | PMI12_01447 | Not Available | Negative | 1485082 - 1486359 | 46198.9 |
| lysyl-trna synthetase (class ii) | PMI12_01448 | Not Available | Negative | 1486356 - 1487918 | 58351.6 |
| peptidase s16, lon domain protein | PMI12_01449 | Not Available | Negative | 1488042 - 1488686 | 23795.2 |
| putative integral membrane protein | PMI12_01450 | Not Available | Positive | 1488736 - 1489296 | 20508.5 |
| acetyl-coa carboxylase, carboxyl transferase, beta subunit | PMI12_01451 | Not Available | Negative | 1489365 - 1490237 | 31648.4 |
| tryptophan synthase, alpha subunit | PMI12_01452 | Not Available | Negative | 1490304 - 1491149 | 29602.1 |
| tryptophan synthase, beta subunit | PMI12_01453 | Not Available | Negative | 1491149 - 1492426 | 45759.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
