Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic serine protease, do/deqq family | PMI12_01434 | Not Available | Positive | 1472174 - 1473655 | 52579.0 |
| gtp-binding protein lepa | PMI12_01435 | Not Available | Positive | 1474177 - 1475988 | 66146.0 |
| signal peptidase i | PMI12_01436 | Not Available | Positive | 1475997 - 1476962 | 36121.7 |
| hypothetical protein | PMI12_01437 | Not Available | Positive | 1476997 - 1477365 | 13524.5 |
| ribonuclease iii | PMI12_01438 | Not Available | Positive | 1477383 - 1478069 | 24666.8 |
| gtp-binding protein era | PMI12_01439 | Not Available | Positive | 1478077 - 1479042 | 35567.9 |
| dna repair protein reco | PMI12_01440 | Not Available | Positive | 1479172 - 1479942 | 28045.7 |
| pyridoxine 5''-phosphate synthase | PMI12_01441 | Not Available | Positive | 1479939 - 1480715 | 27529.5 |
| holo-(acyl-carrier-protein) synthase | PMI12_01442 | Not Available | Positive | 1480729 - 1481121 | 14757.8 |
| beta-glucosidase-like glycosyl hydrolase | PMI12_01443 | Not Available | Positive | 1481118 - 1482212 | 39640.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
