Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fatty acid/phospholipid synthesis protein plsx | PMI12_01424 | Not Available | Positive | 1463621 - 1464652 | 35866.2 |
| 3-oxoacyl-(acyl-carrier-protein) synthase iii | PMI12_01425 | Not Available | Positive | 1464652 - 1465632 | 34284.3 |
| malonyl coa-acyl carrier protein transacylase | PMI12_01426 | Not Available | Positive | 1465686 - 1466639 | 32433.3 |
| 3-oxoacyl-(acyl-carrier-protein) reductase | PMI12_01427 | Not Available | Positive | 1466666 - 1467409 | 25654.9 |
| acyl carrier protein | PMI12_01428 | Not Available | Positive | 1467508 - 1467747 | 8643.06 |
| beta-ketoacyl-acyl-carrier-protein synthase ii | PMI12_01429 | Not Available | Positive | 1467847 - 1469091 | 43500.8 |
| hypothetical protein | PMI12_01430 | Not Available | Positive | 1469108 - 1469590 | 17276.8 |
| rna polymerase sigma factor rpoe | PMI12_01431 | Not Available | Positive | 1469601 - 1470275 | 25164.0 |
| negative regulator of sigma e activity | PMI12_01432 | Not Available | Positive | 1470293 - 1470967 | 23236.6 |
| negative regulator of sigma e activity | PMI12_01433 | Not Available | Positive | 1470997 - 1472079 | 39611.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
