Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease, rne/rng family | PMI12_01414 | Not Available | Negative | 1453064 - 1456270 | 117360.0 |
| pseudouridine synthase, rlua family | PMI12_01415 | Not Available | Positive | 1456821 - 1457933 | 39790.4 |
| haloacid dehalogenase superfamily enzyme, subfamily ia | PMI12_01416 | Not Available | Positive | 1457926 - 1458597 | 24460.0 |
| ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase | PMI12_01417 | Not Available | Positive | 1458607 - 1458978 | 13664.1 |
| clpp class periplasmic serine protease | PMI12_01418 | Not Available | Positive | 1458980 - 1459996 | 36857.2 |
| fucose permease | PMI12_01419 | Not Available | Negative | 1460001 - 1461155 | 38385.3 |
| putative methyltransferase | PMI12_01420 | Not Available | Negative | 1461158 - 1461928 | 27259.9 |
| maf protein | PMI12_01421 | Not Available | Negative | 1461925 - 1462506 | 20749.9 |
| putative metal-binding protein, possibly nucleic-acid binding protein | PMI12_01422 | Not Available | Positive | 1462589 - 1463146 | 20223.7 |
| ribosomal protein l32 | PMI12_01423 | Not Available | Positive | 1463311 - 1463493 | 6685.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
