Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipase l1-like esterase | PMI12_01394 | Not Available | Negative | 1431421 - 1432152 | 26757.8 |
| hypothetical protein | PMI12_01395 | Not Available | Negative | 1432181 - 1432930 | 26302.0 |
| rna polymerase sigma factor, sigma-70 family | PMI12_01396 | Not Available | Negative | 1432962 - 1433555 | 22527.2 |
| hypothetical protein | PMI12_01397 | Not Available | Positive | 1433698 - 1434237 | 20454.7 |
| hypothetical protein | PMI12_01398 | Not Available | Positive | 1434277 - 1435587 | 48347.0 |
| putative membrane protein | PMI12_01399 | Not Available | Negative | 1435601 - 1437016 | 52827.9 |
| argininosuccinate lyase | PMI12_01400 | Not Available | Negative | 1437090 - 1438487 | 51231.7 |
| histidine kinase | PMI12_01401 | Not Available | Positive | 1438619 - 1439617 | 35963.1 |
| response regulator of the lytr/algr family | PMI12_01402 | Not Available | Positive | 1439709 - 1440458 | 28007.6 |
| putative permease | PMI12_01403 | Not Available | Positive | 1440455 - 1441723 | 45247.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
