Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf2848) | PMI12_01384 | Not Available | Negative | 1412933 - 1413667 | 26735.8 |
| major facilitator superfamily transporter | PMI12_01385 | Not Available | Negative | 1413671 - 1414999 | 47112.2 |
| hypothetical protein | PMI12_01386 | Not Available | Negative | 1415053 - 1415697 | 22888.1 |
| transcriptional regulator | PMI12_01387 | Not Available | Negative | 1415889 - 1416806 | 33004.1 |
| ketosteroid isomerase-like protein | PMI12_01388 | Not Available | Negative | 1416909 - 1417277 | 13516.0 |
| efflux transporter, outer membrane factor lipoprotein, nodt family | PMI12_01389 | Not Available | Negative | 1417372 - 1420773 | 123191.0 |
| hypothetical protein | PMI12_01390 | Not Available | Negative | 1420761 - 1422074 | 46340.3 |
| multidrug resistance efflux pump | PMI12_01391 | Not Available | Negative | 1422112 - 1423413 | 46292.2 |
| large extracellular alpha-helical protein | PMI12_01392 | Not Available | Negative | 1423952 - 1429975 | 217198.0 |
| hypothetical protein | PMI12_01393 | Not Available | Positive | 1430172 - 1431314 | 42624.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
