Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain alcohol dehydrogenase | PMI12_01374 | Not Available | Positive | 1403288 - 1404154 | 29993.7 |
| abc-type multidrug transport system, atpase component | PMI12_01375 | Not Available | Negative | 1404164 - 1404796 | 22192.6 |
| hypothetical protein | PMI12_01376 | Not Available | Positive | 1404873 - 1405640 | 27991.3 |
| cyanate permease | PMI12_01377 | Not Available | Negative | 1405647 - 1406939 | 44082.3 |
| transcriptional regulator | PMI12_01378 | Not Available | Negative | 1406936 - 1407619 | 24337.2 |
| penicillin-binding protein 1c | PMI12_01379 | Not Available | Negative | 1407763 - 1410015 | 81477.9 |
| hypothetical protein | PMI12_01380 | Not Available | Positive | 1410280 - 1410486 | 7753.01 |
| putative threonine efflux protein | PMI12_01381 | Not Available | Negative | 1410554 - 1411180 | 21970.4 |
| hypothetical protein | PMI12_01382 | Not Available | Negative | 1411235 - 1411513 | 10038.9 |
| amidase, asp-trnaasn/glu-trnagln amidotransferase a subunit | PMI12_01383 | Not Available | Negative | 1411545 - 1412936 | 48132.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
