Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | PMI12_01364 | Not Available | Negative | 1394653 - 1395261 | 21661.2 |
| hypothetical protein | PMI12_01365 | Not Available | Positive | 1395347 - 1395781 | 17335.2 |
| cyanate hydratase | PMI12_01366 | Not Available | Positive | 1395803 - 1396246 | 16554.1 |
| short-chain alcohol dehydrogenase | PMI12_01367 | Not Available | Negative | 1396240 - 1396998 | 26935.6 |
| hypothetical protein | PMI12_01368 | Not Available | Negative | 1397248 - 1397841 | 21886.1 |
| nucleoside 2-deoxyribosyltransferase | PMI12_01369 | Not Available | Positive | 1397962 - 1398522 | 19429.2 |
| lysophospholipase | PMI12_01370 | Not Available | Positive | 1398579 - 1399451 | 31469.5 |
| protein of unknown function (duf1161) | PMI12_01371 | Not Available | Negative | 1399482 - 1399841 | 11929.4 |
| isocitrate dehydrogenase, nadp-dependent, monomeric type | PMI12_01372 | Not Available | Negative | 1399841 - 1402078 | 82376.2 |
| transcriptional regulator | PMI12_01373 | Not Available | Negative | 1402229 - 1403170 | 33220.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
