Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type sugar transport system, atpase component | PMI12_01354 | Not Available | Positive | 1384125 - 1385639 | 55119.4 |
| permease component of ribose/xylose/arabinose/galactoside abc-type transporters | PMI12_01355 | Not Available | Positive | 1385657 - 1386694 | 35914.0 |
| abc-type sugar transport system, periplasmic component | PMI12_01356 | Not Available | Positive | 1386730 - 1387683 | 33607.6 |
| enolase superfamily enzyme related to l-alanine-dl-glutamate epimerase | PMI12_01357 | Not Available | Positive | 1387705 - 1388982 | 47593.4 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_01358 | Not Available | Positive | 1389001 - 1389777 | 27633.1 |
| hypothetical protein | PMI12_01359 | Not Available | Positive | 1389807 - 1390136 | 12920.5 |
| putative transcriptional regulator | PMI12_01360 | Not Available | Positive | 1390214 - 1390654 | 15845.0 |
| alpha-hydroxyacid dehydrogenase, fmn-dependent l-lactate dehydrogenase | PMI12_01361 | Not Available | Negative | 1390740 - 1391897 | 42042.9 |
| transcriptional regulator | PMI12_01362 | Not Available | Negative | 1392010 - 1392894 | 32846.6 |
| l-lactate transport | PMI12_01363 | Not Available | Positive | 1393014 - 1394675 | 58744.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
