Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_01344 | Not Available | Negative | 1375424 - 1376044 | 23343.2 |
| trap-type mannitol/chloroaromatic compound transport system, large permease component | PMI12_01345 | Not Available | Negative | 1376131 - 1377621 | 51906.5 |
| tripartite atp-independent periplasmic transporters, dctq component | PMI12_01346 | Not Available | Negative | 1377622 - 1378143 | 18807.2 |
| hypothetical protein | PMI12_01347 | Not Available | Positive | 1378197 - 1378802 | 22647.7 |
| transcriptional regulator containing an amidase domain and an arac-type dna-binding hth domain | PMI12_01348 | Not Available | Negative | 1378838 - 1379791 | 34326.2 |
| tellurite resistance protein-like permease | PMI12_01349 | Not Available | Positive | 1379901 - 1380905 | 34938.7 |
| methylase involved in ubiquinone/menaquinone biosynthesis | PMI12_01350 | Not Available | Negative | 1380909 - 1381766 | 30763.6 |
| putative transcriptional regulator | PMI12_01351 | Not Available | Positive | 1381845 - 1382270 | 15383.8 |
| transcriptional regulator | PMI12_01352 | Not Available | Negative | 1382271 - 1383053 | 29167.1 |
| putative tim-barrel fold metal-dependent hydrolase | PMI12_01353 | Not Available | Positive | 1383241 - 1384128 | 32881.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
