Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l28 | PMI12_01304 | Not Available | Negative | 1332003 - 1332236 | 8779.65 |
| thioredoxin-disulfide reductase | PMI12_01305 | Not Available | Negative | 1332420 - 1333379 | 34398.1 |
| camp-binding protein | PMI12_01306 | Not Available | Positive | 1333560 - 1334234 | 24942.5 |
| dna segregation atpase, ftsk/spoiiie family | PMI12_01307 | Not Available | Positive | 1334335 - 1336767 | 88300.1 |
| periplasmic chaperone lola | PMI12_01308 | Not Available | Positive | 1336930 - 1337562 | 22692.0 |
| aaa atpase | PMI12_01309 | Not Available | Positive | 1337573 - 1338865 | 47468.8 |
| branched-chain amino acid abc-type transport system, permease component | PMI12_01310 | Not Available | Positive | 1339106 - 1340035 | 32496.3 |
| abc-type branched-chain amino acid transport system, permease component | PMI12_01311 | Not Available | Positive | 1340046 - 1341254 | 42758.5 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_01312 | Not Available | Positive | 1341275 - 1342048 | 28091.0 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_01313 | Not Available | Positive | 1342050 - 1342826 | 27517.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
