Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_01294 | Not Available | Negative | 1321837 - 1323198 | 47927.4 |
| acyl-coa dehydrogenase | PMI12_01295 | Not Available | Negative | 1323382 - 1324497 | 39967.7 |
| acyl-coa dehydrogenase | PMI12_01296 | Not Available | Negative | 1324510 - 1325691 | 43825.5 |
| phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent | PMI12_01297 | Not Available | Positive | 1325823 - 1326419 | 20791.2 |
| peptidase inhibitor i78 family | PMI12_01298 | Not Available | Positive | 1326457 - 1326774 | 10528.7 |
| protein of unknown function (duf1653) | PMI12_01299 | Not Available | Negative | 1326844 - 1327077 | 8802.49 |
| zn-dependent protease with chaperone function | PMI12_01300 | Not Available | Positive | 1327128 - 1328981 | 70487.1 |
| trna/rrna cytosine-c5-methylase | PMI12_01301 | Not Available | Positive | 1329023 - 1330294 | 46538.9 |
| fatty-acid desaturase | PMI12_01302 | Not Available | Positive | 1330427 - 1331641 | 46018.6 |
| ribosomal protein l33 | PMI12_01303 | Not Available | Negative | 1331818 - 1331991 | 6547.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
