Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type fe3+ transport system, periplasmic component | PMI12_01284 | Not Available | Negative | 1310869 - 1311879 | 36236.5 |
| transcriptional regulator | PMI12_01285 | Not Available | Negative | 1311923 - 1312942 | 35591.9 |
| lipoprotein signal peptidase | PMI12_01286 | Not Available | Negative | 1313087 - 1313602 | 18746.9 |
| isoleucyl-trna synthetase | PMI12_01287 | Not Available | Negative | 1313602 - 1316451 | 106144.0 |
| riboflavin kinase/fmn adenylyltransferase | PMI12_01288 | Not Available | Negative | 1316583 - 1317620 | 37368.8 |
| restriction endonuclease | PMI12_01289 | Not Available | Positive | 1317786 - 1318346 | 21033.3 |
| protein of unknown function (duf3182) | PMI12_01290 | Not Available | Positive | 1318478 - 1319656 | 42074.8 |
| hypothetical protein | PMI12_01291 | Not Available | Positive | 1319640 - 1320416 | 27844.3 |
| hypothetical protein | PMI12_01292 | Not Available | Negative | 1320451 - 1320882 | 15253.4 |
| enoyl-coa hydratase/carnithine racemase | PMI12_01293 | Not Available | Negative | 1321035 - 1321823 | 27799.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
