Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dehydrogenase | PMI12_01274 | Not Available | Positive | 1299954 - 1301081 | 40187.7 |
| pap2 superfamily protein | PMI12_01275 | Not Available | Positive | 1301107 - 1301811 | 25425.5 |
| protein of unknown function (duf3617) | PMI12_01276 | Not Available | Positive | 1301889 - 1302416 | 18429.4 |
| putative exonuclease, dna ligase-associated | PMI12_01277 | Not Available | Positive | 1302508 - 1303635 | 40284.4 |
| dna ligase, atp-dependent, pp_1105 family | PMI12_01278 | Not Available | Positive | 1303632 - 1305287 | 61505.3 |
| dexh box helicase, dna ligase-associated | PMI12_01279 | Not Available | Positive | 1305284 - 1308037 | 100273.0 |
| thioredoxin | PMI12_01280 | Not Available | Negative | 1308043 - 1308492 | 16125.3 |
| metallophosphoesterase, dna ligase-associated | PMI12_01281 | Not Available | Positive | 1308570 - 1309247 | 24447.3 |
| putative membrane protein | PMI12_01282 | Not Available | Negative | 1309293 - 1309823 | 19833.7 |
| beta-propeller domain-containing protein, methanol dehydrogenase | PMI12_01283 | Not Available | Negative | 1309829 - 1310822 | 32948.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
