Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_01254 | Not Available | Negative | 1281709 - 1282503 | 28935.4 |
| hypothetical protein | PMI12_01255 | Not Available | Negative | 1282500 - 1283975 | 53825.2 |
| lipoate synthase | PMI12_01256 | Not Available | Negative | 1283972 - 1284973 | 37176.7 |
| lipoate-protein ligase b | PMI12_01257 | Not Available | Negative | 1284981 - 1285709 | 25924.1 |
| hypothetical protein | PMI12_01258 | Not Available | Negative | 1285741 - 1286049 | 11202.3 |
| branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase | PMI12_01259 | Not Available | Negative | 1286046 - 1286939 | 32547.3 |
| f0f1-type atp synthase, subunit i | PMI12_01260 | Not Available | Positive | 1287097 - 1287582 | 17468.6 |
| f0f1-type atp synthase, alpha subunit | PMI12_01261 | Not Available | Positive | 1287587 - 1288456 | 31661.2 |
| atp synthase, f0 subunit c | PMI12_01262 | Not Available | Positive | 1288518 - 1288781 | 8966.35 |
| atp synthase, f0 subunit b | PMI12_01263 | Not Available | Positive | 1288863 - 1289333 | 16781.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
