Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose efflux permease family protein | PMI12_01244 | Not Available | Negative | 1270712 - 1271965 | 42492.8 |
| hypothetical protein | PMI12_01245 | Not Available | Negative | 1271985 - 1272737 | 25559.1 |
| response regulator with chey-like receiver, aaa-type atpase, and dna-binding domains | PMI12_01246 | Not Available | Negative | 1272888 - 1274246 | 48650.8 |
| signal transduction histidine kinase | PMI12_01247 | Not Available | Negative | 1274231 - 1275691 | 51949.0 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | PMI12_01248 | Not Available | Negative | 1275688 - 1277217 | 55033.6 |
| putative membrane protein | PMI12_01249 | Not Available | Positive | 1277413 - 1277655 | 8031.23 |
| hypothetical protein | PMI12_01250 | Not Available | Positive | 1277669 - 1278163 | 16676.9 |
| galactosyl transferase gma12/mnn10 family | PMI12_01251 | Not Available | Negative | 1278179 - 1279606 | 52826.2 |
| putative plp-dependent enzyme possibly involved in cell wall biogenesis | PMI12_01252 | Not Available | Negative | 1279653 - 1280759 | 39166.9 |
| putative dehydrogenase | PMI12_01253 | Not Available | Negative | 1280756 - 1281712 | 34007.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
