Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | PMI12_01234 | Not Available | Positive | 1259457 - 1260812 | 50374.6 |
| putative nadp-dependent oxidoreductase | PMI12_01235 | Not Available | Positive | 1260931 - 1261974 | 37065.1 |
| p pilus assembly protein, pilin fima | PMI12_01236 | Not Available | Positive | 1262145 - 1262714 | 18796.4 |
| p pilus assembly protein, chaperone papd | PMI12_01237 | Not Available | Positive | 1262866 - 1263642 | 27914.9 |
| p pilus assembly protein, porin papc | PMI12_01238 | Not Available | Positive | 1263663 - 1266326 | 95690.2 |
| p pilus assembly protein, pilin fima | PMI12_01239 | Not Available | Positive | 1266323 - 1267324 | 35031.8 |
| hypothetical protein | PMI12_01240 | Not Available | Negative | 1267332 - 1267655 | 11484.7 |
| putative permease | PMI12_01241 | Not Available | Negative | 1267732 - 1268571 | 29605.3 |
| dna-binding domain-containing protein, arac-type | PMI12_01242 | Not Available | Negative | 1268769 - 1269479 | 25558.3 |
| na+/h+ antiporter nhad-like permease | PMI12_01243 | Not Available | Negative | 1269564 - 1270715 | 40948.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
