Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa synthetase/amp-acid ligase | PMI12_01224 | Not Available | Negative | 1249416 - 1251038 | 58137.1 |
| acyl-coa dehydrogenase | PMI12_01225 | Not Available | Negative | 1251044 - 1252237 | 42093.6 |
| enoyl-coa hydratase/carnithine racemase | PMI12_01226 | Not Available | Negative | 1252242 - 1253096 | 30479.8 |
| transcriptional regulator | PMI12_01227 | Not Available | Negative | 1253093 - 1253575 | 18424.3 |
| nadh:flavin oxidoreductase | PMI12_01228 | Not Available | Negative | 1253577 - 1255952 | 87398.7 |
| methyltransferase, cyclopropane fatty acid synthase | PMI12_01229 | Not Available | Positive | 1256075 - 1257352 | 47483.9 |
| protein of unknown function (duf1840) | PMI12_01230 | Not Available | Positive | 1257364 - 1257687 | 11824.2 |
| hypothetical protein | PMI12_01231 | Not Available | Positive | 1257793 - 1258283 | 16784.4 |
| hypothetical protein | PMI12_01232 | Not Available | Positive | 1258277 - 1258669 | 13650.9 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI12_01233 | Not Available | Positive | 1258720 - 1259418 | 25930.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
