Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s5, bacterial/organelle type | PMI12_01213 | Not Available | Positive | 1242934 - 1243452 | 18039.1 |
| ribosomal protein l30, bacterial/organelle | PMI12_01214 | Not Available | Positive | 1243488 - 1243673 | 6762.44 |
| ribosomal protein l15, bacterial/organelle | PMI12_01215 | Not Available | Positive | 1243685 - 1244116 | 14582.1 |
| preprotein translocase, secy subunit | PMI12_01216 | Not Available | Positive | 1244144 - 1245457 | 47398.2 |
| 30s ribosomal protein s11 | PMI12_01218 | Not Available | Positive | 1246037 - 1246441 | 14142.9 |
| ribosomal protein s4, bacterial/organelle type | PMI12_01219 | Not Available | Positive | 1246572 - 1247195 | 23538.2 |
| dna-directed rna polymerase, alpha subunit | PMI12_01220 | Not Available | Positive | 1247338 - 1248327 | 36184.6 |
| ribosomal protein l17 | PMI12_01221 | Not Available | Positive | 1248419 - 1248817 | 14902.4 |
| Trna-met | Not Available | Not Available | Positive | 1248836 - 1248912 | Not Available |
| putative translation initiation inhibitor, yjgf family | PMI12_01223 | Not Available | Negative | 1249021 - 1249419 | 14680.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
