Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | PMI12_01173 | Not Available | Positive | 1201771 - 1203726 | 70441.7 |
| hypothetical protein | PMI12_01174 | Not Available | Positive | 1203877 - 1204383 | 18770.7 |
| hypothetical protein | PMI12_01175 | Not Available | Positive | 1204411 - 1204869 | 14583.7 |
| hypothetical protein | PMI12_01176 | Not Available | Positive | 1204866 - 1205657 | 28600.5 |
| k+ transporter | PMI12_01177 | Not Available | Positive | 1205676 - 1206791 | 41478.0 |
| protein of unknown function (duf3597) | PMI12_01178 | Not Available | Positive | 1206884 - 1207261 | 12666.3 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_01179 | Not Available | Negative | 1207394 - 1208170 | 27475.7 |
| hypothetical protein | PMI12_01180 | Not Available | Positive | 1208308 - 1208673 | 12652.6 |
| pp_01151 | PMI12_01181 | Not Available | Negative | 1208683 - 1209855 | Not Available |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | PMI12_01182 | Not Available | Negative | 1209861 - 1210904 | 37883.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
