Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_01163 | Not Available | Negative | 1192299 - 1193894 | 54624.9 |
| d-alanyl-d-alanine carboxypeptidase, serine-type, pbp4 family | PMI12_01164 | Not Available | Negative | 1194032 - 1195453 | 50451.3 |
| trgb like protein | PMI12_01165 | Not Available | Negative | 1195461 - 1196048 | 21952.1 |
| transcriptional regulator of sugar metabolism | PMI12_01166 | Not Available | Positive | 1196128 - 1196895 | 26437.1 |
| universal bacterial protein yeaz | PMI12_01167 | Not Available | Positive | 1196930 - 1197640 | 24172.1 |
| ribosomal-protein-alanine acetyltransferase | PMI12_01168 | Not Available | Positive | 1197645 - 1198187 | 19887.9 |
| uracil-dna glycosylase | PMI12_01169 | Not Available | Positive | 1198184 - 1198969 | 26839.3 |
| orotidine 5''-phosphate decarboxylase, subfamily 2 | PMI12_01170 | Not Available | Positive | 1199085 - 1199906 | 29234.8 |
| hypothetical protein | PMI12_01171 | Not Available | Negative | 1200012 - 1200746 | 27934.1 |
| hypothetical protein | PMI12_01172 | Not Available | Positive | 1200893 - 1201756 | 30844.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
