Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_01143 | Not Available | Positive | 1170289 - 1170861 | 21214.3 |
| transcriptional regulator | PMI12_01144 | Not Available | Negative | 1170856 - 1171782 | 33856.8 |
| putative translation initiation inhibitor, yjgf family | PMI12_01145 | Not Available | Positive | 1171914 - 1172318 | 14905.5 |
| transcriptional regulator | PMI12_01146 | Not Available | Negative | 1172366 - 1173037 | 25107.2 |
| hypothetical protein | PMI12_01147 | Not Available | Positive | 1173164 - 1173673 | 18802.2 |
| glycosidase | PMI12_01148 | Not Available | Positive | 1173734 - 1175407 | 62120.7 |
| putative hydrolase, coce/nond family | PMI12_01149 | Not Available | Negative | 1175412 - 1177703 | 85088.9 |
| abc-type uncharacterized transport system, permease and atpase component | PMI12_01150 | Not Available | Negative | 1177700 - 1179460 | 64114.9 |
| glycosyl hydrolase, glucoamylase | PMI12_01151 | Not Available | Negative | 1179463 - 1180845 | 50160.9 |
| hypothetical protein | PMI12_01152 | Not Available | Negative | 1180842 - 1182137 | 48354.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
