Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein icmf | PMI12_01133 | Not Available | Positive | 1159119 - 1162721 | 132703.0 |
| type vi secretion-associated protein, bma_a0400 family | PMI12_01134 | Not Available | Positive | 1162718 - 1163362 | 23395.7 |
| hypothetical protein | PMI12_01135 | Not Available | Negative | 1163932 - 1164513 | 21541.8 |
| hypothetical protein | PMI12_01136 | Not Available | Positive | 1165139 - 1165753 | 22197.1 |
| cupin domain-containing protein | PMI12_01137 | Not Available | Positive | 1165722 - 1166165 | 15810.9 |
| transcriptional regulator | PMI12_01138 | Not Available | Positive | 1166255 - 1166848 | 20778.7 |
| zn-dependent oxidoreductase, nadph:quinone reductase | PMI12_01139 | Not Available | Positive | 1166946 - 1167947 | 36271.4 |
| short-chain dehydrogenase of unknown substrate specificity | PMI12_01140 | Not Available | Positive | 1167985 - 1168689 | 24677.6 |
| putative fe-s-cluster redox enzyme | PMI12_01141 | Not Available | Positive | 1168787 - 1169821 | 37765.8 |
| putative transcriptional regulator | PMI12_01142 | Not Available | Negative | 1169818 - 1170123 | 9954.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
