Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator containing an amidase domain and an arac-type dna-binding hth domain | PMI12_01123 | Not Available | Positive | 1146244 - 1147221 | 35370.5 |
| methyltransferase, fkbm family | PMI12_01124 | Not Available | Negative | 1147248 - 1148117 | 31861.7 |
| hypothetical protein | PMI12_01125 | Not Available | Negative | 1148114 - 1148911 | 29159.6 |
| signal transduction histidine kinase | PMI12_01126 | Not Available | Negative | 1148934 - 1150856 | 68077.9 |
| abc-type uncharacterized transport system, periplasmic component | PMI12_01127 | Not Available | Negative | 1150904 - 1151971 | 36407.7 |
| signal transduction histidine kinase | PMI12_01128 | Not Available | Negative | 1152127 - 1154016 | 68167.4 |
| phosphate/phosphite/phosphonate abc transporters, periplasmic binding protein | PMI12_01129 | Not Available | Positive | 1154178 - 1155212 | 38099.8 |
| phosphate/phosphite/phosphonate abc transporters, periplasmic binding protein | PMI12_01130 | Not Available | Positive | 1155212 - 1156285 | 39433.6 |
| type vi secretion protein, vc_a0114 family | PMI12_01131 | Not Available | Positive | 1156429 - 1157760 | 49142.3 |
| type vi secretion system ompa/motb family protein | PMI12_01132 | Not Available | Positive | 1157791 - 1159122 | 47448.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
