Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose efflux permease family protein | PMI12_01103 | Not Available | Positive | 1119097 - 1120551 | 49335.2 |
| protein of unknown function (duf3053) | PMI12_01104 | Not Available | Positive | 1120588 - 1121298 | 25525.7 |
| thiamine-monophosphate kinase | PMI12_01105 | Not Available | Negative | 1121319 - 1122275 | 32600.9 |
| hypothetical protein | PMI12_01106 | Not Available | Positive | 1122398 - 1123342 | 33254.6 |
| peptidase propeptide domain-containing protein | PMI12_01107 | Not Available | Positive | 1123339 - 1123563 | 8103.79 |
| carboxylate-amine ligase, ybdk family | PMI12_01108 | Not Available | Negative | 1123604 - 1124818 | 45614.1 |
| kef-type k+ transport system, membrane component | PMI12_01109 | Not Available | Negative | 1124815 - 1126086 | 44258.3 |
| hypothetical protein affecting mg2+/co2+ transport | PMI12_01110 | Not Available | Negative | 1126235 - 1126630 | 14162.8 |
| ribulose-phosphate 3-epimerase | PMI12_01111 | Not Available | Positive | 1126690 - 1127385 | 24424.3 |
| hypothetical protein | PMI12_01112 | Not Available | Negative | 1127375 - 1127647 | 9569.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
