Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein | PMI12_01083 | Not Available | Positive | 1100636 - 1101403 | 26119.9 |
| protein-disulfide isomerase | PMI12_01084 | Not Available | Positive | 1101548 - 1102195 | 23355.0 |
| lipopolysaccharide transport periplasmic protein lpta | PMI12_01085 | Not Available | Positive | 1102393 - 1103109 | 25003.5 |
| abc-type (unclassified) transport system, atpase component | PMI12_01086 | Not Available | Positive | 1103106 - 1103900 | 28957.0 |
| rna polymerase sigma-54 factor | PMI12_01087 | Not Available | Positive | 1104055 - 1105632 | 57984.5 |
| phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase | PMI12_01088 | Not Available | Positive | 1105652 - 1107337 | 61888.2 |
| hypothetical protein | PMI12_01089 | Not Available | Negative | 1107375 - 1108019 | 23040.5 |
| hypothetical protein | PMI12_01090 | Not Available | Negative | 1108076 - 1108669 | 20747.0 |
| cytochrome b561 | PMI12_01091 | Not Available | Negative | 1108666 - 1109250 | 21588.8 |
| signal transduction histidine kinase | PMI12_01092 | Not Available | Negative | 1109342 - 1111132 | 64248.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
