Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_01073 | Not Available | Negative | 1090868 - 1091416 | 20043.2 |
| putative hydrolase or acyltransferase of alpha/beta superfamily | PMI12_01074 | Not Available | Negative | 1091429 - 1092304 | 32352.6 |
| abc-type branched-chain amino acid transport system, permease component | PMI12_01075 | Not Available | Negative | 1092420 - 1093487 | 38139.8 |
| branched-chain amino acid abc-type transport system, permease component | PMI12_01076 | Not Available | Negative | 1093502 - 1094485 | 34547.0 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_01077 | Not Available | Negative | 1094631 - 1095362 | 26441.3 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_01078 | Not Available | Negative | 1095359 - 1096123 | 27162.9 |
| poly(3-hydroxybutyrate) depolymerase | PMI12_01079 | Not Available | Negative | 1096165 - 1097610 | 49553.7 |
| putative membrane protein | PMI12_01080 | Not Available | Positive | 1097918 - 1098370 | 16734.3 |
| hypothetical protein | PMI12_01081 | Not Available | Negative | 1098478 - 1098807 | 10476.7 |
| arginyl-trna synthetase | PMI12_01082 | Not Available | Positive | 1098940 - 1100625 | 61310.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
