Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| k+ transporter | PMI12_01063 | Not Available | Negative | 1081960 - 1083804 | 66185.4 |
| squalene synthase hpnc | PMI12_01064 | Not Available | Positive | 1083881 - 1084870 | 36672.0 |
| squalene synthase hpnd | PMI12_01065 | Not Available | Positive | 1084867 - 1085706 | 31525.0 |
| squalene-associated fad-dependent desaturase | PMI12_01066 | Not Available | Positive | 1085709 - 1086971 | 44264.1 |
| hypothetical protein | PMI12_01067 | Not Available | Positive | 1086968 - 1087276 | 11379.8 |
| putative threonine efflux protein | PMI12_01068 | Not Available | Negative | 1087283 - 1087924 | 22720.2 |
| hypothetical protein | PMI12_01069 | Not Available | Positive | 1088041 - 1088346 | 11945.2 |
| haloacid dehalogenase superfamily enzyme, subfamily ia | PMI12_01070 | Not Available | Negative | 1088350 - 1089081 | 26354.7 |
| ferrochelatase | PMI12_01071 | Not Available | Positive | 1089097 - 1090134 | 38002.3 |
| thiol-disulfide isomerase-like thioredoxin | PMI12_01072 | Not Available | Negative | 1090171 - 1090743 | 21271.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
