Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-cys | Not Available | Not Available | Positive | 1069897 - 1069970 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1070034 - 1070109 | Not Available |
| atp-dependent protease la | PMI12_01055 | Not Available | Negative | 1070171 - 1072612 | 89307.7 |
| endopeptidase clp atp-binding regulatory subunit clpx | PMI12_01056 | Not Available | Negative | 1072636 - 1073901 | 46194.8 |
| atp-dependent clp protease, proteolytic subunit clpp | PMI12_01057 | Not Available | Negative | 1074012 - 1074620 | 22298.9 |
| trigger factor | PMI12_01058 | Not Available | Negative | 1074733 - 1076049 | 48743.9 |
| hypothetical protein | PMI12_01059 | Not Available | Positive | 1076317 - 1077237 | 31409.7 |
| Trna-leu | Not Available | Not Available | Positive | 1077321 - 1077407 | Not Available |
| cation/multidrug efflux pump | PMI12_01061 | Not Available | Negative | 1077509 - 1080670 | 114492.0 |
| rnd family efflux transporter, mfp subunit | PMI12_01062 | Not Available | Negative | 1080667 - 1081866 | 41350.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
