Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine/l-proline transport atp binding subunit | PMI12_01043 | Not Available | Positive | 1062064 - 1063317 | 45069.4 |
| abc-type proline/glycine betaine transport system, permease component | PMI12_01044 | Not Available | Positive | 1063339 - 1064499 | 41002.0 |
| hypothetical protein | PMI12_01045 | Not Available | Positive | 1064523 - 1064717 | 6815.52 |
| abc-type proline/glycine betaine transport system, periplasmic component | PMI12_01046 | Not Available | Positive | 1064721 - 1065527 | 29827.0 |
| hydro-lyase, fe-s type, tartrate/fumarate subfamily | PMI12_01047 | Not Available | Positive | 1065585 - 1067138 | 55292.7 |
| glutamate racemase | PMI12_01048 | Not Available | Positive | 1067197 - 1067985 | 27179.6 |
| hypothetical protein | PMI12_01049 | Not Available | Positive | 1067991 - 1068770 | 28908.6 |
| hypothetical protein | PMI12_01050 | Not Available | Negative | 1068777 - 1069028 | 8963.16 |
| hypothetical protein | PMI12_01051 | Not Available | Negative | 1069053 - 1069685 | 23467.3 |
| Trna-leu | Not Available | Not Available | Positive | 1069706 - 1069797 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
