Pontibacter sp. BAB1700

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter sp. BAB1700 is a Gram-negative bacterium characterized by its rod shape. It is notable for possessing a single replicon, which indicates that it has a streamlined genomic structure that can be advantageous for certain metabolic processes and adaptations. The genome of Pontibacter sp. BAB1700 is accessible under the accession number AKIS00000000.1, which provides a reference point for further genomic studies and comparisons within the genus Pontibacter. The genus Pontibacter is known for its ecological significance, often found in diverse environments such as marine and extreme habitats. The traits of Pontibacter sp. BAB1700 may suggest its potential role in biogeochemical cycles, particularly in nutrient cycling in its native habitat. The Gram-negative nature of this bacterium may also imply certain metabolic capabilities, such as the ability to interact with various organic compounds and participate in degradation processes. Understanding the specific traits of Pontibacter sp. BAB1700 can provide insights into its ecological functions, particularly in environments where it may contribute to microbial diversity and ecosystem stability. The unique combination of its Gram-negative classification, rod shape, and genomic organization positions Pontibacter sp. BAB1700 as an intriguing subject for further research into its ecological roles and potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter sp. BAB1700
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pontibacter sp. BAB1700 contig267, whole genome shotgun sequence.

Gene Summary

Adenine Count

1133646 bp

Thymine Count

1134967 bp

Guanine Count

1129326 bp

Cytosine Count

1139226 bp

Genome Length

4537217 bp

Protein-coding Genes

4044 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
capsular exopolysaccharide family proteinO71_15490Not AvailablePositive2953382 - 295573987951.7
udp-glucose/gdp-mannose dehydrogenaseO71_15495Not AvailablePositive2955820 - 295625315894.9
hypothetical proteinO71_15500Not AvailablePositive2956381 - 295667710842.7
nadph-dependent fmn reductaseO71_15505Not AvailablePositive2956665 - 295703914088.9
crp family transcriptional regulatorO71_15510Not AvailablePositive2957134 - 295771222261.8
coenzyme f420-dependent nadp oxidoreductaseO71_15515Not AvailablePositive2957817 - 295848823572.2
hypothetical proteinO71_15520Not AvailablePositive2958533 - 295910520968.9
doxx family proteinO71_15525Not AvailablePositive2959126 - 295957816184.6
extradiol ring-cleavage dioxygenase class iii protein subunit bO71_15530Not AvailablePositive2959648 - 29598668005.95
hypothetical proteinO71_15535Not AvailablePositive2960131 - 296050214825.3

Displaying genes 2601 – 2610 of 4091 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.