Pontibacter sp. BAB1700

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter sp. BAB1700 is a Gram-negative bacterium characterized by its rod shape. It is notable for possessing a single replicon, which indicates that it has a streamlined genomic structure that can be advantageous for certain metabolic processes and adaptations. The genome of Pontibacter sp. BAB1700 is accessible under the accession number AKIS00000000.1, which provides a reference point for further genomic studies and comparisons within the genus Pontibacter. The genus Pontibacter is known for its ecological significance, often found in diverse environments such as marine and extreme habitats. The traits of Pontibacter sp. BAB1700 may suggest its potential role in biogeochemical cycles, particularly in nutrient cycling in its native habitat. The Gram-negative nature of this bacterium may also imply certain metabolic capabilities, such as the ability to interact with various organic compounds and participate in degradation processes. Understanding the specific traits of Pontibacter sp. BAB1700 can provide insights into its ecological functions, particularly in environments where it may contribute to microbial diversity and ecosystem stability. The unique combination of its Gram-negative classification, rod shape, and genomic organization positions Pontibacter sp. BAB1700 as an intriguing subject for further research into its ecological roles and potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter sp. BAB1700
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pontibacter sp. BAB1700 contig267, whole genome shotgun sequence.

Gene Summary

Adenine Count

1133646 bp

Thymine Count

1134967 bp

Guanine Count

1129326 bp

Cytosine Count

1139226 bp

Genome Length

4537217 bp

Protein-coding Genes

4044 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha,alpha-trehalaseO71_14776Not AvailableNegative2819566 - 28198028793.5
family 2 glycosyl transferaseO71_14781Not AvailableNegative2819804 - 282022616594.1
pp_02452O71_14786Not AvailablePositive2820501 - 2821631Not Available
yjgp/yjgq family permeaseO71_14791Not AvailablePositive2821645 - 282272140820.0
4-diphosphocytidyl-2-c-methyl-d-erythritol kinaseO71_14806Not AvailableNegative2823620 - 282444430156.5
cys/met metabolism pyridoxal-phosphate-dependent proteinO71_14811Not AvailableNegative2824530 - 282525226469.5
cystathionine gamma-lyaseO71_14816Not AvailableNegative2825285 - 282566213896.3
oxidoreductase fad-binding domain-containing proteinO71_14821Not AvailablePositive2825808 - 282687539892.3
hypothetical proteinO71_14826Not AvailablePositive2827087 - 282743112419.1
beta-lactamase peptidase family s12O71_14831Not AvailablePositive2827450 - 282906360897.1

Displaying genes 2481 – 2490 of 4091 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.