Pontibacter sp. BAB1700

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter sp. BAB1700 is a Gram-negative bacterium characterized by its rod shape. It is notable for possessing a single replicon, which indicates that it has a streamlined genomic structure that can be advantageous for certain metabolic processes and adaptations. The genome of Pontibacter sp. BAB1700 is accessible under the accession number AKIS00000000.1, which provides a reference point for further genomic studies and comparisons within the genus Pontibacter. The genus Pontibacter is known for its ecological significance, often found in diverse environments such as marine and extreme habitats. The traits of Pontibacter sp. BAB1700 may suggest its potential role in biogeochemical cycles, particularly in nutrient cycling in its native habitat. The Gram-negative nature of this bacterium may also imply certain metabolic capabilities, such as the ability to interact with various organic compounds and participate in degradation processes. Understanding the specific traits of Pontibacter sp. BAB1700 can provide insights into its ecological functions, particularly in environments where it may contribute to microbial diversity and ecosystem stability. The unique combination of its Gram-negative classification, rod shape, and genomic organization positions Pontibacter sp. BAB1700 as an intriguing subject for further research into its ecological roles and potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter sp. BAB1700
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pontibacter sp. BAB1700 contig267, whole genome shotgun sequence.

Gene Summary

Adenine Count

1133646 bp

Thymine Count

1134967 bp

Guanine Count

1129326 bp

Cytosine Count

1139226 bp

Genome Length

4537217 bp

Protein-coding Genes

4044 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinO71_09674Not AvailablePositive1839188 - 1842742130571.0
peptidase m16 domain-containing proteinO71_09689Not AvailablePositive1843931 - 184521149002.4
hypothetical proteinO71_09694Not AvailableNegative1845612 - 184600414480.6
hypothetical proteinO71_09699Not AvailableNegative1846210 - 184684823297.4
long-chain fatty acid transport protein, outer membrane proteinO71_09724Not AvailableNegative1851386 - 185262443577.3
pyridine nucleotide-disulfide oxidoreductase,class iiO71_09729Not AvailablePositive1852859 - 185376733249.7
cyanophycinaseO71_09734Not AvailableNegative1853764 - 18539888268.92
cyanophycinaseO71_09739Not AvailableNegative1854015 - 185460821913.2
hypothetical proteinO71_09744Not AvailableNegative1855753 - 185640024142.3
class i peptide chain release factorO71_09749Not AvailableNegative1856605 - 185702115890.9

Displaying genes 1611 – 1620 of 4091 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.