Pontibacter sp. BAB1700

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter sp. BAB1700 is a Gram-negative bacterium characterized by its rod shape. It is notable for possessing a single replicon, which indicates that it has a streamlined genomic structure that can be advantageous for certain metabolic processes and adaptations. The genome of Pontibacter sp. BAB1700 is accessible under the accession number AKIS00000000.1, which provides a reference point for further genomic studies and comparisons within the genus Pontibacter. The genus Pontibacter is known for its ecological significance, often found in diverse environments such as marine and extreme habitats. The traits of Pontibacter sp. BAB1700 may suggest its potential role in biogeochemical cycles, particularly in nutrient cycling in its native habitat. The Gram-negative nature of this bacterium may also imply certain metabolic capabilities, such as the ability to interact with various organic compounds and participate in degradation processes. Understanding the specific traits of Pontibacter sp. BAB1700 can provide insights into its ecological functions, particularly in environments where it may contribute to microbial diversity and ecosystem stability. The unique combination of its Gram-negative classification, rod shape, and genomic organization positions Pontibacter sp. BAB1700 as an intriguing subject for further research into its ecological roles and potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter sp. BAB1700
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pontibacter sp. BAB1700 contig267, whole genome shotgun sequence.

Gene Summary

Adenine Count

1133646 bp

Thymine Count

1134967 bp

Guanine Count

1129326 bp

Cytosine Count

1139226 bp

Genome Length

4537217 bp

Protein-coding Genes

4044 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
orn/dap/arg decarboxylase 2O71_06839Not AvailableNegative1296652 - 129804654447.8
arginase/agmatinase/formiminoglutamaseO71_06844Not AvailablePositive1298280 - 129918833873.1
glutathione peroxidaseO71_06859Not AvailablePositive1301129 - 130172221683.6
1,4-dihydroxy-2-naphthoate octaprenyltransferaseO71_06864Not AvailablePositive1301744 - 130270934830.5
bifunctional pyrazinamidase/nicotinamidaseO71_06869Not AvailableNegative1302727 - 130333522014.0
lmbe family proteinO71_06874Not AvailableNegative1303485 - 130420127216.0
hypothetical proteinO71_06879Not AvailableNegative1304301 - 130492423037.0
dead/deah box helicaseO71_06894Not AvailableNegative1308034 - 130947353319.8
cadmium-translocating p-type atpaseO71_06899Not AvailablePositive1309750 - 131177773165.0
arsenite efflux protein acr3 familyO71_06904Not AvailablePositive1312030 - 13122819211.97

Displaying genes 1131 – 1140 of 4091 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.