Vibrio tasmaniensis 1F-187

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio tasmaniensis 1F-187 is a bacterium characterized by a single replicon, which indicates a relatively simple genomic organization. The organism is cataloged under the accession number AJZM00000000.3, providing a reference point for genetic and genomic studies. This species is classified within the Vibrio genus, which is known for its diverse ecological roles, particularly in marine environments. The presence of a single replicon may suggest streamlined genetic processes, perhaps allowing for efficient adaptation to its ecological niche. Vibrio species are often associated with aquatic habitats and can play significant roles in nutrient cycling and interactions within microbial communities. The study of Vibrio tasmaniensis 1F-187 may provide insights into the evolutionary pathways and ecological adaptations of the Vibrio genus, especially in relation to its survival strategies in various marine ecosystems. Understanding its genomic features could lead to broader implications for microbial ecology and the dynamics of bacterial populations in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio tasmaniensis
Strain1F-187

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio tasmaniensis 1F-187
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio tasmaniensis 1F-187 1F187_I01_contig0159, whole genome

Gene Summary

Adenine Count

1501976 bp

Thymine Count

1510517 bp

Guanine Count

1171657 bp

Cytosine Count

1164801 bp

Genome Length

5350034 bp

Protein-coding Genes

4727 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4174 domain-containing proteinA152_0021410Not AvailablePositive4823757 - 482424518201.9
uroporphyrinogen-iii c-methyltransferaseA152_0021415Not AvailableNegative4824354 - 482513028136.7
formate/nitrite transporter family proteinA152_0021420Not AvailableNegative4825447 - 482626228930.6
nitrite reductase small subunit nirdA152_0021425Not AvailableNegative4826438 - 482676111597.0
nitrite reductase large subunit nirbA152_0021430Not AvailableNegative4826777 - 482933593056.4
hypothetical proteinA152_0021435Not AvailablePositive4829645 - 483030424554.4
gyri-like domain-containing proteinA152_0021440Not AvailableNegative4830475 - 48306968778.65
atp-binding proteinA152_0021445Not AvailablePositive4831109 - 483308274436.9
sigma-54-dependent transcriptional regulatorA152_0021450Not AvailablePositive4833079 - 483443149829.2
glycerophosphodiester phosphodiesterase family proteinA152_0021455Not AvailablePositive4834707 - 483592744486.5

Displaying genes 4211 – 4220 of 4727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.