Vibrio tasmaniensis 1F-187

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio tasmaniensis 1F-187 is a bacterium characterized by a single replicon, which indicates a relatively simple genomic organization. The organism is cataloged under the accession number AJZM00000000.3, providing a reference point for genetic and genomic studies. This species is classified within the Vibrio genus, which is known for its diverse ecological roles, particularly in marine environments. The presence of a single replicon may suggest streamlined genetic processes, perhaps allowing for efficient adaptation to its ecological niche. Vibrio species are often associated with aquatic habitats and can play significant roles in nutrient cycling and interactions within microbial communities. The study of Vibrio tasmaniensis 1F-187 may provide insights into the evolutionary pathways and ecological adaptations of the Vibrio genus, especially in relation to its survival strategies in various marine ecosystems. Understanding its genomic features could lead to broader implications for microbial ecology and the dynamics of bacterial populations in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio tasmaniensis
Strain1F-187

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio tasmaniensis 1F-187
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio tasmaniensis 1F-187 1F187_I01_contig0159, whole genome

Gene Summary

Adenine Count

1501976 bp

Thymine Count

1510517 bp

Guanine Count

1171657 bp

Cytosine Count

1164801 bp

Genome Length

5350034 bp

Protein-coding Genes

4727 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
class 1a ribonucleoside-diphosphate reductase subunit alphaA152_0016165Not AvailableNegative3664031 - 366631385511.3
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubigA152_0016170Not AvailableNegative3666818 - 366756427805.6
dna topoisomerase (atp-hydrolyzing) subunit aA152_0016175Not AvailablePositive3667823 - 367051098875.6
tetratricopeptide repeat proteinA152_0016180Not AvailablePositive3670711 - 367134023490.1
rhodanese-like domain-containing proteinA152_0016185Not AvailableNegative3671461 - 367180512529.0
ammonia-forming nitrite reductase cytochrome c552 subunitA152_0016190Not AvailableNegative3671937 - 367336753848.2
cytochrome c nitrite reductase pentaheme subunitA152_0016195Not AvailablePositive3673849 - 367443321546.4
cytochrome c nitrite reductase fe-s proteinA152_0016200Not AvailablePositive3674437 - 367512324964.6
cytochrome c nitrite reductase subunit nrfdA152_0016205Not AvailablePositive3675126 - 367610035881.9
heme lyase ccmf/nrfe family subunitA152_0016210Not AvailablePositive3676229 - 367814570833.2

Displaying genes 3181 – 3190 of 4727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.