Vibrio tasmaniensis 1F-187

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio tasmaniensis 1F-187 is a bacterium characterized by a single replicon, which indicates a relatively simple genomic organization. The organism is cataloged under the accession number AJZM00000000.3, providing a reference point for genetic and genomic studies. This species is classified within the Vibrio genus, which is known for its diverse ecological roles, particularly in marine environments. The presence of a single replicon may suggest streamlined genetic processes, perhaps allowing for efficient adaptation to its ecological niche. Vibrio species are often associated with aquatic habitats and can play significant roles in nutrient cycling and interactions within microbial communities. The study of Vibrio tasmaniensis 1F-187 may provide insights into the evolutionary pathways and ecological adaptations of the Vibrio genus, especially in relation to its survival strategies in various marine ecosystems. Understanding its genomic features could lead to broader implications for microbial ecology and the dynamics of bacterial populations in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio tasmaniensis
Strain1F-187

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio tasmaniensis 1F-187
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio tasmaniensis 1F-187 1F187_I01_contig0159, whole genome

Gene Summary

Adenine Count

1501976 bp

Thymine Count

1510517 bp

Guanine Count

1171657 bp

Cytosine Count

1164801 bp

Genome Length

5350034 bp

Protein-coding Genes

4727 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3069 domain-containing proteinA152_0012680Not AvailablePositive2886262 - 288669916754.9
molybdenum abc transporter atp-binding protein modcA152_0012685Not AvailableNegative2887147 - 288825340669.1
molybdate abc transporter permease subunitA152_0012690Not AvailableNegative2888259 - 288895725090.7
molybdate abc transporter substrate-binding proteinA152_0012695Not AvailableNegative2888958 - 288971627888.7
cobyric acid synthaseA152_0012700Not AvailableNegative2889774 - 289124052747.9
ygiw/ydei family stress tolerance ob fold proteinA152_0012705Not AvailablePositive2891503 - 289191614938.5
hypothetical proteinA152_0012710Not AvailablePositive2892029 - 289255319014.4
methyl-accepting chemotaxis proteinA152_0012715Not AvailablePositive2892844 - 289473068316.5
abc-f family atpaseA152_0012720Not AvailableNegative2894963 - 289657059652.2
rimk/lysx family proteinA152_0012725Not AvailableNegative2896863 - 289754925346.1

Displaying genes 2501 – 2510 of 4727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.