Vibrio tasmaniensis 1F-187

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio tasmaniensis 1F-187 is a bacterium characterized by a single replicon, which indicates a relatively simple genomic organization. The organism is cataloged under the accession number AJZM00000000.3, providing a reference point for genetic and genomic studies. This species is classified within the Vibrio genus, which is known for its diverse ecological roles, particularly in marine environments. The presence of a single replicon may suggest streamlined genetic processes, perhaps allowing for efficient adaptation to its ecological niche. Vibrio species are often associated with aquatic habitats and can play significant roles in nutrient cycling and interactions within microbial communities. The study of Vibrio tasmaniensis 1F-187 may provide insights into the evolutionary pathways and ecological adaptations of the Vibrio genus, especially in relation to its survival strategies in various marine ecosystems. Understanding its genomic features could lead to broader implications for microbial ecology and the dynamics of bacterial populations in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio tasmaniensis
Strain1F-187

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio tasmaniensis 1F-187
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio tasmaniensis 1F-187 1F187_I01_contig0159, whole genome

Gene Summary

Adenine Count

1501976 bp

Thymine Count

1510517 bp

Guanine Count

1171657 bp

Cytosine Count

1164801 bp

Genome Length

5350034 bp

Protein-coding Genes

4727 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisbA152_0010600Not AvailablePositive2452648 - 245373640375.3
imidazole glycerol phosphate synthase subunit hishA152_0010605Not AvailablePositive2453761 - 245437522403.0
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseA152_0010610Not AvailablePositive2454419 - 245515626322.3
imidazole glycerol phosphate synthase subunit hisfA152_0010615Not AvailablePositive2455138 - 245591128374.9
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisieA152_0010620Not AvailablePositive2455908 - 245655823852.3
ychj family proteinA152_0010625Not AvailableNegative2456808 - 245732019169.3
eal and hdod domain-containing proteinA152_0010630Not AvailableNegative2457439 - 245865645751.5
udp-2,3-diacylglucosamine diphosphataseA152_0010635Not AvailableNegative2458780 - 245951428292.6
peptidylprolyl isomeraseA152_0010640Not AvailableNegative2459599 - 246009318095.5
cysteine--trna ligaseA152_0010645Not AvailablePositive2460284 - 246166952172.6

Displaying genes 2091 – 2100 of 4727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.