Vibrio tasmaniensis 1F-187

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio tasmaniensis 1F-187 is a bacterium characterized by a single replicon, which indicates a relatively simple genomic organization. The organism is cataloged under the accession number AJZM00000000.3, providing a reference point for genetic and genomic studies. This species is classified within the Vibrio genus, which is known for its diverse ecological roles, particularly in marine environments. The presence of a single replicon may suggest streamlined genetic processes, perhaps allowing for efficient adaptation to its ecological niche. Vibrio species are often associated with aquatic habitats and can play significant roles in nutrient cycling and interactions within microbial communities. The study of Vibrio tasmaniensis 1F-187 may provide insights into the evolutionary pathways and ecological adaptations of the Vibrio genus, especially in relation to its survival strategies in various marine ecosystems. Understanding its genomic features could lead to broader implications for microbial ecology and the dynamics of bacterial populations in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio tasmaniensis
Strain1F-187

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio tasmaniensis 1F-187
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio tasmaniensis 1F-187 1F187_I01_contig0159, whole genome

Gene Summary

Adenine Count

1501976 bp

Thymine Count

1510517 bp

Guanine Count

1171657 bp

Cytosine Count

1164801 bp

Genome Length

5350034 bp

Protein-coding Genes

4727 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinate dehydrogenase, hydrophobic membrane anchor proteinA152_0000875Not AvailablePositive180338 - 18068512806.9
succinate dehydrogenase flavoprotein subunitA152_0000880Not AvailablePositive180686 - 18245264362.2
succinate dehydrogenase iron-sulfur subunitA152_0000885Not AvailablePositive182465 - 18317826542.0
2-oxoglutarate dehydrogenase e1 componentA152_0000890Not AvailablePositive183276 - 186095105799.0
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferaseA152_0000895Not AvailablePositive186117 - 18732543594.6
adp-forming succinate--coa ligase subunit betaA152_0000900Not AvailablePositive187532 - 18869841518.0
succinate--coa ligase subunit alphaA152_0000905Not AvailablePositive188698 - 18957029997.3
zinc abc transporter permease subunit znubA152_0000910Not AvailableNegative189714 - 19049927705.3
zinc abc transporter atp-binding protein znucA152_0000915Not AvailableNegative190499 - 19127828889.9
zinc abc transporter substrate-binding protein znuaA152_0000920Not AvailablePositive191362 - 19224632560.5

Displaying genes 191 – 200 of 4727 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.