Vibrio kanaloae 5S-149

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio kanaloae 5S-149 is a bacterial strain characterized by a single replicon. This trait indicates that the organism has a single circular chromosome, which is typical for many members of the Vibrio genus. The genetic information for this strain is cataloged under the accession number AJYX00000000.3, a reference that allows for further exploration of its genomic data. As a member of the Vibrio genus, V. kanaloae is likely to exhibit traits commonly associated with this group, such as motility and the ability to thrive in aquatic environments. Vibrio species are often found in marine habitats and can play essential roles in nutrient cycling and ecological balance within these ecosystems. The presence of only one replicon suggests a streamlined genetic architecture, which may contribute to the organism's adaptability to its environment. This could be particularly relevant in fluctuating marine conditions, where efficient replication and expression of genetic material are advantageous for survival. In summary, Vibrio kanaloae 5S-149, with its single replicon and genomic reference, represents a specific adaptation within the Vibrio genus. Understanding its genetic characteristics can provide insights into the ecological roles of Vibrio species in marine ecosystems, particularly regarding their contributions to nutrient cycling and environmental interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio kanaloae
Strain5S-149

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio kanaloae 5S-149
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio kanaloae 5S-149 5S149_I01_contig0064, whole genome shotgun

Gene Summary

Adenine Count

1300868 bp

Thymine Count

1296694 bp

Guanine Count

1007525 bp

Cytosine Count

1012856 bp

Genome Length

4618721 bp

Protein-coding Genes

3991 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4381 domain-containing proteinA132_0016570Not AvailablePositive3777503 - 377806321443.9
vwa domain-containing proteinA132_0016575O07395Positive3778056 - 377913539428.4
vwa domain-containing proteinA132_0016580Not AvailablePositive3779128 - 378085264335.0
batd family proteinA132_0016585Not AvailablePositive3780849 - 378223152282.4
lysr family transcriptional regulatorA132_0016590P46924Positive3782310 - 378321534154.3
lipid kinase yegsA132_0016595Q87IB3Positive3783250 - 378415832487.6
formylglycine-generating enzyme family proteinA132_0016600V9TSX0Negative3784325 - 378511329010.8
anaerobic sulfatase maturaseA132_0016605Q02550Positive3785251 - 378658250659.8
hypothetical proteinA132_0016610Not AvailablePositive3786676 - 378773439599.6
response regulatorA132_0016615Not AvailableNegative3787844 - 3791047119539.0

Displaying genes 3291 – 3300 of 4075 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

216 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 216 metabolites

Health Effects

No health effects information available for this bacterium.