Vibrio genomosp. F10 str. ZF-129

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio genomosp. F10 strain ZF-129 is characterized by having a single replicon, which is typical for many members of the Vibrio genus. This trait may influence its genomic stability and replication dynamics. The strain is cataloged under the accession AJYQ00000000.2, indicating its genetic sequence is available for further studies. The Vibrio genus is known for its ecological significance, often inhabiting marine environments and playing crucial roles in nutrient cycling. While specific ecological interactions of V. genomosp. F10 str. ZF-129 are not detailed, members of this genus are generally associated with various marine organisms and can participate in symbiotic relationships or act as pathogens. Understanding the genomic structure, including the number of replicons, can provide insights into the adaptability and evolutionary potential of this strain within its ecological niche. The presence of a single replicon might suggest a streamlined genome, possibly allowing for efficient resource utilization in its natural habitat. As such, V. genomosp. F10 str. ZF-129 may contribute to the microbial diversity and functional dynamics of marine ecosystems, reflecting the importance of genomic studies in elucidating microbial roles in environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio genomosp. F10
StrainZF-129

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio genomosp. F10 str. ZF-129
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio genomosp. F10 str. ZF-129 ZF-129_contig_99, whole genome

Gene Summary

Adenine Count

1255481 bp

Thymine Count

1248467 bp

Guanine Count

966108 bp

Cytosine Count

947878 bp

Genome Length

4418179 bp

Protein-coding Genes

3908 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
inositol monophosphataseA1QO_14275Not AvailableNegative3919181 - 391998429047.7
trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmjA1QO_14280Not AvailablePositive3920161 - 392088926984.5
fe-s cluster assembly transcriptional regulator iscrA1QO_14285Not AvailablePositive3920999 - 392150517942.4
iscs subfamily cysteine desulfuraseA1QO_14290Not AvailablePositive3921533 - 392274744763.3
fe-s cluster assembly scaffold iscuA1QO_14295Not AvailablePositive3922781 - 392315813418.9
iron-sulfur cluster assembly protein iscaA1QO_14300Not AvailablePositive3923226 - 392354911645.7
co-chaperone hscbA1QO_14305Not AvailablePositive3923631 - 392414619891.8
fe-s protein assembly chaperone hscaA1QO_14310Not AvailablePositive3924171 - 392602466102.8
ferredoxin, 2fe-2s type, isc systemA1QO_14315Not AvailablePositive3926045 - 392638312169.4
fe-s assembly protein iscxA1QO_14320Not AvailablePositive3926423 - 39266237946.33

Displaying genes 3451 – 3460 of 3908 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.