Vibrio genomosp. F10 str. ZF-129

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio genomosp. F10 strain ZF-129 is characterized by having a single replicon, which is typical for many members of the Vibrio genus. This trait may influence its genomic stability and replication dynamics. The strain is cataloged under the accession AJYQ00000000.2, indicating its genetic sequence is available for further studies. The Vibrio genus is known for its ecological significance, often inhabiting marine environments and playing crucial roles in nutrient cycling. While specific ecological interactions of V. genomosp. F10 str. ZF-129 are not detailed, members of this genus are generally associated with various marine organisms and can participate in symbiotic relationships or act as pathogens. Understanding the genomic structure, including the number of replicons, can provide insights into the adaptability and evolutionary potential of this strain within its ecological niche. The presence of a single replicon might suggest a streamlined genome, possibly allowing for efficient resource utilization in its natural habitat. As such, V. genomosp. F10 str. ZF-129 may contribute to the microbial diversity and functional dynamics of marine ecosystems, reflecting the importance of genomic studies in elucidating microbial roles in environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio genomosp. F10
StrainZF-129

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio genomosp. F10 str. ZF-129
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio genomosp. F10 str. ZF-129 ZF-129_contig_99, whole genome

Gene Summary

Adenine Count

1255481 bp

Thymine Count

1248467 bp

Guanine Count

966108 bp

Cytosine Count

947878 bp

Genome Length

4418179 bp

Protein-coding Genes

3908 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molecular chaperone djlaA1QO_12080Not AvailablePositive3318649 - 331949731219.4
reactive intermediate/imine deaminaseA1QO_12085Not AvailableNegative3319583 - 331997213854.6
aspartate carbamoyltransferase regulatory subunitA1QO_12090Not AvailableNegative3320162 - 332062317221.7
aspartate carbamoyltransferaseA1QO_12095Not AvailableNegative3320635 - 332158234962.3
ornithine carbamoyltransferaseA1QO_12100Not AvailableNegative3321856 - 332286037242.6
atpaseA1QO_12105Not AvailableNegative3323003 - 332437951486.5
hypothetical proteinA1QO_12110Not AvailableNegative3324372 - 33245908255.06
rna polymerase-binding atpaseA1QO_12115Not AvailablePositive3324856 - 3327762109231.0
rna pseudouridine synthaseA1QO_12120Not AvailablePositive3327949 - 332868628061.6
glycerate dehydrogenaseA1QO_12125Not AvailablePositive3328700 - 332966835172.3

Displaying genes 2961 – 2970 of 3908 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.