Vibrio genomosp. F10 str. ZF-129

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio genomosp. F10 strain ZF-129 is characterized by having a single replicon, which is typical for many members of the Vibrio genus. This trait may influence its genomic stability and replication dynamics. The strain is cataloged under the accession AJYQ00000000.2, indicating its genetic sequence is available for further studies. The Vibrio genus is known for its ecological significance, often inhabiting marine environments and playing crucial roles in nutrient cycling. While specific ecological interactions of V. genomosp. F10 str. ZF-129 are not detailed, members of this genus are generally associated with various marine organisms and can participate in symbiotic relationships or act as pathogens. Understanding the genomic structure, including the number of replicons, can provide insights into the adaptability and evolutionary potential of this strain within its ecological niche. The presence of a single replicon might suggest a streamlined genome, possibly allowing for efficient resource utilization in its natural habitat. As such, V. genomosp. F10 str. ZF-129 may contribute to the microbial diversity and functional dynamics of marine ecosystems, reflecting the importance of genomic studies in elucidating microbial roles in environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio genomosp. F10
StrainZF-129

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio genomosp. F10 str. ZF-129
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio genomosp. F10 str. ZF-129 ZF-129_contig_99, whole genome

Gene Summary

Adenine Count

1255481 bp

Thymine Count

1248467 bp

Guanine Count

966108 bp

Cytosine Count

947878 bp

Genome Length

4418179 bp

Protein-coding Genes

3908 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
formate c-acetyltransferaseA1QO_08920Not AvailableNegative2418830 - 242110684042.7
hypothetical proteinA1QO_08925Not AvailableNegative2421408 - 242295555282.6
histidine/lysine/arginine/ornithine abc transporter atp-binding proteinA1QO_08930Not AvailablePositive2423566 - 242433628301.1
nickel transporterA1QO_08935Not AvailablePositive2424431 - 242520128209.7
abc transporterA1QO_08940Not AvailablePositive2425300 - 242604027136.8
amino acid abc transporter permeaseA1QO_08945Not AvailablePositive2426044 - 242672125408.3
exodeoxyribonuclease iiiA1QO_08950Not AvailableNegative2426852 - 242766130862.6
chemotaxis proteinA1QO_08955Not AvailablePositive2427872 - 242998975840.4
cytochrome d terminal oxidase subunit 1A1QO_08960Not AvailablePositive2430531 - 243211759434.5
cytochrome d ubiquinol oxidase subunit iiA1QO_08965Not AvailablePositive2432132 - 243326841949.7

Displaying genes 2191 – 2200 of 3908 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.