Rhodanobacter fulvus Jip2

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Rhodanobacter

Description

Rhodanobacter fulvus Jip2 is a Gram-negative bacterium characterized by its rod-shaped morphology and aerobic metabolic requirements. This species has been cataloged with a single replicon, which is significant for its genetic stability and replication processes. The genomic sequence of Rhodanobacter fulvus Jip2 is available under the accession AJXU00000000.1, making it accessible for further research and analysis. As an aerobic organism, Rhodanobacter fulvus Jip2 relies on oxygen for its growth and energy production, which aligns with its Gram-negative classification that typically indicates a more complex cell wall structure and metabolic versatility. This bacterium is part of a larger group of microorganisms known for their roles in various ecological niches, particularly in soil environments where they may contribute to nutrient cycling and the degradation of organic matter. The ecological insight derived from the traits of Rhodanobacter fulvus Jip2 suggests that its aerobic nature and specific morphology may enable it to occupy a distinct niche in oxygen-rich environments, potentially influencing soil health and ecosystem dynamics. Further research into its metabolic pathways and interactions with other organisms could provide a clearer understanding of its role in ecological processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusRhodanobacter
SpeciesRhodanobacter fulvus
StrainJip2

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodanobacter fulvus Jip2 contig130, whole genome shotgun

Gene Summary

Adenine Count

669949 bp

Thymine Count

664982 bp

Guanine Count

1267809 bp

Cytosine Count

1276860 bp

Genome Length

3879600 bp

Protein-coding Genes

3374 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate 5-dehydrogenaseUU9_13778Not AvailableNegative3127841 - 312867129132.2
hypothetical proteinUU9_13783Not AvailablePositive3128865 - 31291108827.23
glutathione synthase/ribosomal protein s6 modification proteinUU9_13788Not AvailableNegative3129135 - 313061956144.3
acetyltransferaseUU9_13793Not AvailablePositive3130949 - 313144618017.3
2-keto-3-deoxygluconate kinaseUU9_13798Not AvailableNegative3131544 - 313256335557.6
tonb-dependent receptorUU9_13803Not AvailablePositive3132846 - 3135662101157.0
hypothetical proteinUU9_13808Not AvailablePositive3135793 - 3139599141010.0
transglycosylaseUU9_13813Not AvailableNegative3139774 - 314079336698.1
hypothetical proteinUU9_13818Not AvailableNegative3140890 - 314152822686.2
short chain dehydrogenaseUU9_13823Not AvailableNegative3141734 - 314248926208.3

Displaying genes 2771 – 2780 of 3450 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.