Rhodanobacter fulvus Jip2

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Rhodanobacter

Description

Rhodanobacter fulvus Jip2 is a Gram-negative bacterium characterized by its rod-shaped morphology and aerobic metabolic requirements. This species has been cataloged with a single replicon, which is significant for its genetic stability and replication processes. The genomic sequence of Rhodanobacter fulvus Jip2 is available under the accession AJXU00000000.1, making it accessible for further research and analysis. As an aerobic organism, Rhodanobacter fulvus Jip2 relies on oxygen for its growth and energy production, which aligns with its Gram-negative classification that typically indicates a more complex cell wall structure and metabolic versatility. This bacterium is part of a larger group of microorganisms known for their roles in various ecological niches, particularly in soil environments where they may contribute to nutrient cycling and the degradation of organic matter. The ecological insight derived from the traits of Rhodanobacter fulvus Jip2 suggests that its aerobic nature and specific morphology may enable it to occupy a distinct niche in oxygen-rich environments, potentially influencing soil health and ecosystem dynamics. Further research into its metabolic pathways and interactions with other organisms could provide a clearer understanding of its role in ecological processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusRhodanobacter
SpeciesRhodanobacter fulvus
StrainJip2

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodanobacter fulvus Jip2 contig130, whole genome shotgun

Gene Summary

Adenine Count

669949 bp

Thymine Count

664982 bp

Guanine Count

1267809 bp

Cytosine Count

1276860 bp

Genome Length

3879600 bp

Protein-coding Genes

3374 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flavin-dependent oxidoreductaseUU9_10382Not AvailablePositive2410300 - 241128635210.0
serine/threonine protein kinase involved in cell cycle controlUU9_10387Not AvailablePositive2411509 - 241236631732.8
fkbp-type peptidylprolyl isomeraseUU9_10392Not AvailableNegative2412496 - 241293015131.0
hypothetical proteinUU9_10397Not AvailableNegative2412956 - 241351320923.1
pseudouridine synthaseUU9_10402Not AvailablePositive2413573 - 241448734047.0
oligopeptide transporter, opt family proteinUU9_10407Not AvailablePositive2414539 - 241653067835.3
hypothetical proteinUU9_10412Not AvailablePositive2416671 - 241921793527.0
virulence proteinUU9_10417Not AvailablePositive2419214 - 242001128873.8
ribosomal rna small subunit methyltransferase cUU9_10422Not AvailablePositive2420100 - 242116738595.2
ribosomal small subunit pseudouridylate synthaseUU9_10427Not AvailablePositive2421164 - 242187725732.1

Displaying genes 2121 – 2130 of 3450 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.