Rhodanobacter fulvus Jip2

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Rhodanobacter

Description

Rhodanobacter fulvus Jip2 is a Gram-negative bacterium characterized by its rod-shaped morphology and aerobic metabolic requirements. This species has been cataloged with a single replicon, which is significant for its genetic stability and replication processes. The genomic sequence of Rhodanobacter fulvus Jip2 is available under the accession AJXU00000000.1, making it accessible for further research and analysis. As an aerobic organism, Rhodanobacter fulvus Jip2 relies on oxygen for its growth and energy production, which aligns with its Gram-negative classification that typically indicates a more complex cell wall structure and metabolic versatility. This bacterium is part of a larger group of microorganisms known for their roles in various ecological niches, particularly in soil environments where they may contribute to nutrient cycling and the degradation of organic matter. The ecological insight derived from the traits of Rhodanobacter fulvus Jip2 suggests that its aerobic nature and specific morphology may enable it to occupy a distinct niche in oxygen-rich environments, potentially influencing soil health and ecosystem dynamics. Further research into its metabolic pathways and interactions with other organisms could provide a clearer understanding of its role in ecological processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusRhodanobacter
SpeciesRhodanobacter fulvus
StrainJip2

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodanobacter fulvus Jip2 contig130, whole genome shotgun

Gene Summary

Adenine Count

669949 bp

Thymine Count

664982 bp

Guanine Count

1267809 bp

Cytosine Count

1276860 bp

Genome Length

3879600 bp

Protein-coding Genes

3374 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heme/copper-type cytochrome/quinol oxidase, subunit 3UU9_10082Not AvailableNegative2339844 - 234073132973.5
cytochrome c oxidase subunit iUU9_10087Not AvailableNegative2341017 - 234263360173.7
cytochrome c oxidase subunit iiUU9_10092Not AvailableNegative2342708 - 234364333599.3
integral membrane proteinUU9_10097Not AvailableNegative2343664 - 234415517987.4
bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenaseUU9_10102Not AvailablePositive2344455 - 2347616113886.0
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinaseUU9_10107Not AvailableNegative2347666 - 234815418106.7
dihydroneopterin aldolaseUU9_10112Not AvailableNegative2348154 - 234851313386.0
atp-dependent rna helicase dbpaUU9_10117Not AvailablePositive2348739 - 235011849610.2
cytochrome c4UU9_10122Not AvailableNegative2350218 - 235093424317.5
hypothetical proteinUU9_10127Not AvailableNegative2350948 - 235355196404.5

Displaying genes 2061 – 2070 of 3450 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.