Rhodanobacter spathiphylli B39

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Rhodanobacter

Description

Rhodanobacter spathiphylli B39 is a Gram-negative, non-motile rod bacterium that exhibits aerobic metabolic characteristics. It thrives optimally at a temperature of 37°C, positioning it within the mesophilic temperature range. Notably, this species possesses a single replicon and does not form spores. The genome of Rhodanobacter spathiphylli B39 is accessible under the accession number AJXT00000000.1, which allows for further genetic and functional studies. The aerobic nature of Rhodanobacter spathiphylli B39 suggests its role in environments where oxygen is available, potentially contributing to biogeochemical cycles, particularly in soil or plant-associated habitats. The absence of motility indicates that it may rely on passive dispersal mechanisms or interactions with other organisms for colonization and survival. Additionally, the non-spore-forming trait may limit its resilience under extreme environmental conditions, emphasizing the importance of its specific ecological niche. Understanding the traits of Rhodanobacter spathiphylli B39 can provide insights into its ecological roles, especially in relation to nutrient cycling and plant interactions. Its optimal growth temperature aligns with typical conditions found in many terrestrial ecosystems, suggesting that it may play a significant part in the microbiome of plants, potentially influencing plant health and growth.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusRhodanobacter
SpeciesRhodanobacter spathiphylli
StrainB39

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodanobacter spathiphylli B39 contig203, whole genome shotgun

Gene Summary

Adenine Count

653490 bp

Thymine Count

656140 bp

Guanine Count

1301582 bp

Cytosine Count

1299367 bp

Genome Length

3910579 bp

Protein-coding Genes

3439 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane dipeptidaseUU7_08463Not AvailablePositive1886210 - 188742143648.9
beta-lactamaseUU7_08468Not AvailablePositive1887615 - 188903052150.7
peptidase m15d vanx d-ala-d-ala dipeptidaseUU7_08473Not AvailablePositive1889237 - 188993226283.2
beta-lactamaseUU7_08478Not AvailablePositive1889964 - 189101938461.5
n-acetylmuramoyl-l-alanine amidaseUU7_08483Not AvailablePositive1891019 - 189178627799.0
hypothetical proteinUU7_08488Not AvailableNegative1891776 - 189251627138.9
heavy metal efflux pump czcaUU7_08493Not AvailableNegative1892587 - 1895706112845.0
secretion protein hlydUU7_08498Not AvailableNegative1895703 - 189685740664.7
heavy metal cation tricomponent efflux outer membrane porin znecUU7_08503Not AvailableNegative1896875 - 189838952927.6
hypothetical proteinUU7_08508Not AvailablePositive1898603 - 189927124873.9

Displaying genes 1711 – 1720 of 3494 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.