Herbaspirillum sp. GW103 235_6

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Herbaspirillum

Description

Herbaspirillum sp. GW103 235_6 is a Gram-negative bacterium characterized by the presence of flagella, which suggests motility. This trait is essential for its ecological adaptability, allowing the organism to navigate its environment effectively. The strain is defined by a single replicon, indicating a streamlined genomic organization that may contribute to its metabolic efficiency and adaptability. The accession number AJVC00000000.1 provides a reference for genomic data, which can be useful for further studies on its genetic characteristics and potential applications. As a member of the Herbaspirillum genus, this bacterium is likely involved in plant-associated interactions, potentially influencing plant growth and health. The ecological role of Herbaspirillum sp. GW103 235_6 may extend to its involvement in nitrogen fixation or other beneficial plant-microbe interactions, although specific functions are not outlined in the provided information. Its motility, as indicated by the presence of flagella, could facilitate colonization of plant roots or other surfaces, enhancing its ability to engage in symbiotic relationships. In summary, the traits of Herbaspirillum sp. GW103 235_6, such as its Gram-negative classification, motility, and genomic structure, suggest a potential role in ecological interactions, particularly in plant environments, where its motility could enhance its biological functions and benefits to plants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusHerbaspirillum
SpeciesHerbaspirillum sp. GW103
Strain235_6

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Herbaspirillum sp. GW103 235_6, whole genome shotgun sequence.

Gene Summary

Adenine Count

950053 bp

Thymine Count

944925 bp

Guanine Count

1575144 bp

Cytosine Count

1577523 bp

Genome Length

5047645 bp

Protein-coding Genes

4626 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cold-shock transcription regulator proteinGWL_00210Not AvailablePositive21476 - 216857478.74
transketolaseGWL_00220Not AvailableNegative22256 - 2425972530.9
lysr family transcription regulator proteinGWL_00230Not AvailableNegative24388 - 2527532664.3
3-oxoacyl-[acyl-carrier-protein] reductaseGWL_00240Not AvailablePositive25559 - 2630825700.3
trap-type c4-dicarboxylate transport system periplasmic proteinGWL_00250Not AvailablePositive26391 - 2742837882.4
hypothetical proteinGWL_00260Not AvailableNegative27471 - 276264862.97
hypothetical proteinGWL_00270Not AvailableNegative27893 - 281026969.85
aerotaxis sensor receptor transmembrane proteinGWL_00280Not AvailableNegative28288 - 2990156937.7
hypothetical proteinGWL_00290Not AvailableNegative30281 - 3087421688.5
hypothetical proteinGWL_00300Not AvailableNegative30880 - 3118210786.2

Displaying genes 61 – 70 of 4721 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.