Herbaspirillum sp. GW103 235_6

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Herbaspirillum

Description

Herbaspirillum sp. GW103 235_6 is a Gram-negative bacterium characterized by the presence of flagella, which suggests motility. This trait is essential for its ecological adaptability, allowing the organism to navigate its environment effectively. The strain is defined by a single replicon, indicating a streamlined genomic organization that may contribute to its metabolic efficiency and adaptability. The accession number AJVC00000000.1 provides a reference for genomic data, which can be useful for further studies on its genetic characteristics and potential applications. As a member of the Herbaspirillum genus, this bacterium is likely involved in plant-associated interactions, potentially influencing plant growth and health. The ecological role of Herbaspirillum sp. GW103 235_6 may extend to its involvement in nitrogen fixation or other beneficial plant-microbe interactions, although specific functions are not outlined in the provided information. Its motility, as indicated by the presence of flagella, could facilitate colonization of plant roots or other surfaces, enhancing its ability to engage in symbiotic relationships. In summary, the traits of Herbaspirillum sp. GW103 235_6, such as its Gram-negative classification, motility, and genomic structure, suggest a potential role in ecological interactions, particularly in plant environments, where its motility could enhance its biological functions and benefits to plants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusHerbaspirillum
SpeciesHerbaspirillum sp. GW103
Strain235_6

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Herbaspirillum sp. GW103 235_6, whole genome shotgun sequence.

Gene Summary

Adenine Count

950053 bp

Thymine Count

944925 bp

Guanine Count

1575144 bp

Cytosine Count

1577523 bp

Genome Length

5047645 bp

Protein-coding Genes

4626 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fatty acid/phospholipid synthesis proteinGWL_13650Not AvailablePositive1489872 - 149096939008.4
3-oxoacyl-[acyl-carrier-protein] synthase iiiGWL_13660Not AvailablePositive1490987 - 149197334515.6
malonyl coa-[acyl-carrier-protein] transacylaseGWL_13670Not AvailablePositive1492064 - 149299632164.9
3-oxoacyl-[acyl-carrier-protein] reductase oxidoreductaseGWL_13680Not AvailablePositive1492993 - 149374825780.0
acyl carrier proteinGWL_13690Not AvailablePositive1493912 - 14941518761.22
3-oxoacyl-[acyl-carrier-protein] synthase iiGWL_13700Not AvailablePositive1494185 - 149542643648.1
flagellar hook-length control proteinGWL_13710Not AvailablePositive1495583 - 149601115405.5
rna polymerase sigma-e factor (sigma-24) transcription regulator proteinGWL_13720Not AvailablePositive1496103 - 149670522957.4
transmembrane sigma-e factor negative regulatory transcription regulator proteinGWL_13730Not AvailablePositive1496782 - 149747724037.2
sigma-e factor regulatory (negative regulator) transcription regulator proteinGWL_13740Not AvailablePositive1497584 - 149852534912.6

Displaying genes 1421 – 1430 of 4721 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.