Herbaspirillum sp. GW103 235_6

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Herbaspirillum

Description

Herbaspirillum sp. GW103 235_6 is a Gram-negative bacterium characterized by the presence of flagella, which suggests motility. This trait is essential for its ecological adaptability, allowing the organism to navigate its environment effectively. The strain is defined by a single replicon, indicating a streamlined genomic organization that may contribute to its metabolic efficiency and adaptability. The accession number AJVC00000000.1 provides a reference for genomic data, which can be useful for further studies on its genetic characteristics and potential applications. As a member of the Herbaspirillum genus, this bacterium is likely involved in plant-associated interactions, potentially influencing plant growth and health. The ecological role of Herbaspirillum sp. GW103 235_6 may extend to its involvement in nitrogen fixation or other beneficial plant-microbe interactions, although specific functions are not outlined in the provided information. Its motility, as indicated by the presence of flagella, could facilitate colonization of plant roots or other surfaces, enhancing its ability to engage in symbiotic relationships. In summary, the traits of Herbaspirillum sp. GW103 235_6, such as its Gram-negative classification, motility, and genomic structure, suggest a potential role in ecological interactions, particularly in plant environments, where its motility could enhance its biological functions and benefits to plants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusHerbaspirillum
SpeciesHerbaspirillum sp. GW103
Strain235_6

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Herbaspirillum sp. GW103 235_6, whole genome shotgun sequence.

Gene Summary

Adenine Count

950053 bp

Thymine Count

944925 bp

Guanine Count

1575144 bp

Cytosine Count

1577523 bp

Genome Length

5047645 bp

Protein-coding Genes

4626 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
deacetylaseGWL_10790Not AvailablePositive1192888 - 119373630440.9
drug/metabolite transporter (dmt) superfamily permeaseGWL_10800Not AvailablePositive1193738 - 119467933508.7
xre family transcription regulator proteinGWL_10810Not AvailableNegative1194696 - 119549630072.0
ubie/coq5 family sam-dependent methyltransferaseGWL_10820Not AvailablePositive1195626 - 119638727607.9
d-alanyl-d-alanine-endopeptidaseGWL_10830Not AvailablePositive1196804 - 119790439659.1
transcription regulator proteinGWL_10840Not AvailableNegative1198016 - 119880128883.6
sulfate abc transporter periplasmic proteinGWL_10850Not AvailablePositive1199133 - 120014637075.2
nad(p)h-dependent fmn reductaseGWL_10860Not AvailablePositive1200210 - 120080621416.7
alkanesulfonates abc transporter periplasmic proteinGWL_10870Not AvailablePositive1200948 - 120193135374.8
alkanesulfonate monooxygenaseGWL_10880Not AvailablePositive1202037 - 120320342290.3

Displaying genes 1131 – 1140 of 4721 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.